Add the peptide number information to pg_matrix

Add the peptide number information to pg_matrix

Usage

add_peptide_numbers(pg_matrix, peptide_numbers, id_column = "Protein.Group")

Arguments

pg_matrix

The report.pg_matrix file

peptide_numbers

The output from get_nPep_prMatrix

id_column

The column in pr_matrix that is used to match the peptide_numbers and pg_matrix. Should be identical to the column used in get_nPEP_prMatrix

Value

a pg_matrix data frame with added peptide number information

Examples

peptide_numbers <- get_nPep_prMatrix(report.pr_matrix)
pg_matrix <- add_peptide_numbers(report.pg_matrix, peptide_numbers)